Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs9328549 chr9:134000818 A/G 0.000118 116 38.83 42.9 12.75 KM Plot
THYM rs9373088 chr6:134609981 A/T 0.000137 119 38.58 44.67 36.4 KM Plot
THYM rs9373113 chr6:135139531 A/G 9.92E-5 115 37.63 49.85 23.7 KM Plot
THYM rs938256 chr1:227400548 T/C 0.000123 119 42.82 37.13 19.63 KM Plot
THYM rs9391986 chr6:3290583 A/G 1.25E-6 119 10.35 50.07 37.63 KM Plot
THYM rs9392473 chr6:3291236 C/T 1.56E-6 117 36.77 50.07 10.35 KM Plot
THYM rs9392474 chr6:3293731 G/A 1.93E-6 114 35 50.07 10.35 KM Plot
THYM rs9400959 chr6:117133634 G/A 5.68E-5 115 19.03 50.97 38.83 KM Plot
THYM rs9424004 chr10:7116448 C/T 6.75E-11 119 38.33 50.13 12.87 KM Plot
THYM rs9426609 chr1:227421615 C/G 0.000123 119 42.82 37.13 19.63 KM Plot
THYM rs9481676 chr6:117176258 G/A 5.21E-5 117 40.67 49.4 19.03 KM Plot
THYM rs9501966 chr6:3265382 A/G 0 119 4.13 42.73 38.33 KM Plot
THYM rs9501969 chr6:3268641 T/C 0 118 4.13 44.3 38.33 KM Plot
THYM rs9503509 chr6:3268457 C/T 0 118 4.13 44.3 38.33 KM Plot
THYM rs9503510 chr6:3268483 C/T 0 118 4.13 44.3 38.33 KM Plot